primerlab plot

CLI reference for the primerlab plot command

Generate visualizations from primer design results.

Synopsis

primerlab plot <result> [options]

Arguments

Argument	Required	Description
result	Yes	Path to result.json file

Options

Option	Short	Description
--sequence	-s	Path to sequence file (required)
--type	-t	Plot type (default: gc-profile)
--theme		Color theme: light, dark
--output	-o	Output path (PNG/SVG)
--window	-w	Sliding window size (default: 20)

Plot Types

Type	Description
gc-profile	GC content across amplicon

Examples

Basic GC Profile

primerlab plot result.json --sequence input.fasta

Dark Theme

primerlab plot result.json --sequence input.fasta --theme dark

Custom Window Size

primerlab plot result.json --sequence input.fasta --window 50

Save to File

primerlab plot result.json --sequence input.fasta --output gc_profile.png

Output

• Interactive plot displayed (if no —output)
• PNG/SVG file saved (if —output specified)
• Primer positions highlighted on plot