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v0.3.3 - Enhanced report generation with multiple formats.

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Overview

PrimerLab generates comprehensive reports after primer design workflows. Reports include:
  • Design summary and scoring
  • Validation results
  • Off-target analysis
  • Recommendations

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Formats

FormatDescription
markdownHuman-readable, Git-friendly
htmlInteractive with dark/light mode
jsonMachine-readable for pipelines

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CLI Usage

# Generate report after design
primerlab run pcr --config my_config.yaml --report

# Specify format
primerlab run pcr --config my_config.yaml \
  --report --report-format html --report-output report.html

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Report Contents

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Design Summary

  • Primer sequences and properties
  • Tm, GC%, length
  • Overall design score (0-100)

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Validation

  • In-silico PCR results
  • Binding site analysis
  • 3’ stability assessment

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Off-target

  • BLAST hit count
  • Specificity grade (A-F)
  • Risk assessment

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Programmatic Usage

from primerlab.core.report import ReportGenerator, ReportExporter

# Create report
generator = ReportGenerator()
generator.set_design_data(primers, scores)
generator.set_validation_data(insilico_results)

# Export
exporter = ReportExporter(generator.report)
exporter.export("report.html", format="html")

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See Also